docker.io/bdgenomics/rhapsody:2.0 linux/amd64

docker.io/bdgenomics/rhapsody:2.0 - 国内下载镜像源 浏览次数:17

这是一个用于基因组分析的Docker镜像,包含了Rhapsody软件及其依赖项。Rhapsody是一个用于分析基因组数据的工具,可以用于各种基因组学分析任务,例如比对、变异检测和基因表达分析。

源镜像 docker.io/bdgenomics/rhapsody:2.0
国内镜像 swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0
镜像ID sha256:ae8991f6abf72f18bfb7294582c26d3cfc20f8d58a7fdf150a797a6202ff0701
镜像TAG 2.0
大小 3.07GB
镜像源 docker.io
项目信息 Docker-Hub主页 🚀项目TAG 🚀
CMD /bin/bash
启动入口
工作目录 /rhapsody
OS/平台 linux/amd64
浏览量 17 次
贡献者 84******1@qq.com
镜像创建 2023-06-14T23:50:05.993831767Z
同步时间 2025-05-31 12:54
更新时间 2025-06-02 10:43
环境变量
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/condaEnv/bin:/rhapsody/bin:/rhapsody/shell:/rhapsody/trinity:/rhapsody/pythonDeps/bin:/rhapsody/pythonRhapsody/bin:/rhapsody/rscript TZ=US/Pacific LANG=en_US.utf8 FONTCONFIG_PATH=/etc/fonts FONTCONFIG_FILE=/etc/fonts/fonts.conf PYTHONUSERBASE=/rhapsody/pythonDeps PYTHONPATH=/rhapsody/pythonDeps/lib/python3.8/site-packages:/rhapsody/pythonRhapsody/lib/python3.8/site-packages:/condaEnv/lib/python3.9/site-packages:
镜像标签
ubuntu: org.opencontainers.image.ref.name 20.04: org.opencontainers.image.version

Docker拉取命令

docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0
docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0  docker.io/bdgenomics/rhapsody:2.0

Containerd拉取命令

ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0
ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0  docker.io/bdgenomics/rhapsody:2.0

Shell快速替换命令

sed -i 's#bdgenomics/rhapsody:2.0#swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0#' deployment.yaml

Ansible快速分发-Docker

#ansible k8s -m shell -a 'docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0 && docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0  docker.io/bdgenomics/rhapsody:2.0'

Ansible快速分发-Containerd

#ansible k8s -m shell -a 'ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0 && ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0  docker.io/bdgenomics/rhapsody:2.0'

镜像构建历史


# 2023-06-15 07:50:05  118.86MB 
/bin/sh -c #(nop) COPY dir:9b67751092d34407c532643c2de3bb5b5ad3a51d95bbdd3d1e92878ab57eb07d in /rhapsody/pythonRhapsody 
                        
# 2023-06-15 07:50:02  965.15KB 
/bin/sh -c #(nop) COPY file:7e01d6cefc3d06c59cbc52235cef231c2ff1b839b53e83ac9e64d69f7a2084a9 in /rhapsody/bin/ 
                        
# 2023-06-15 07:50:01  2.11MB 
/bin/sh -c #(nop) COPY file:2259194c7df51c2bfc5f586ab52b4f13368c9bc418687d85d28600f656c1918f in /rhapsody/bin/ 
                        
# 2023-06-15 07:50:01  17.74KB 
/bin/sh -c #(nop) COPY file:d85dce272bb35c737d2f25053e9908e4067d0907574e882db9a881064103efba in /rhapsody/bin/ 
                        
# 2023-06-15 07:50:00  34.02MB 
/bin/sh -c #(nop) COPY dir:f6631afb574e96c001f64fc8843036e76d37b008e2857b4fc476883cc1b3a02b in /rhapsody/trinity 
                        
# 2023-06-15 07:49:58  23.12KB 
/bin/sh -c chmod +x /rhapsody/shell/*.sh
                        
# 2023-06-15 07:49:58  5.88KB 
/bin/sh -c #(nop) ADD dir:74368d792b549d00457dc2c2ca256e8bef03450477fdacb5a4a7a8b173e95413 in /rhapsody/rscript/ 
                        
# 2023-06-15 07:49:58  23.12KB 
/bin/sh -c #(nop) ADD dir:ee446b9ce417bb0c9a05d9ea57325ea83e69de3da1eb4ff2a00001d7df23414a in /rhapsody/shell/ 
                        
# 2023-06-15 07:49:58  10.69MB 
/bin/sh -c #(nop) ADD dir:34895e9ebf88c78f5d4be435ba2f925b4700b795231d49642a05f233abe6aca3 in /rhapsody/control_files 
                        
# 2023-06-15 07:49:58  7.17MB 
/bin/sh -c #(nop) ADD file:5ca9b80b1b397e928d34138092d74e35f1efc088242a6f0b4c4a7eeffb62c7b8 in /rhapsody/bin/STAR 
                        
# 2023-06-15 07:49:57  16.78MB 
/bin/sh -c mkdir -p /rhapsody/vdj_constant_region_reference_index      && bowtie2-build --quiet human_c_fragments.fasta /rhapsody/vdj_constant_region_reference_index/humanVDJCidx      && rm human_c_fragments.fasta      && mkdir -p /rhapsody/vdj_constant_region_reference_index      && bowtie2-build --quiet mouse_c_fragments.fasta /rhapsody/vdj_constant_region_reference_index/mouseVDJCidx      && rm mouse_c_fragments.fasta
                        
# 2023-06-15 07:49:57  1.06KB 
/bin/sh -c #(nop) ADD file:8a1f6256078b14a4f0cd47295d65b64276ca4e438ff0c982df511f8108e3819c in . 
                        
# 2023-06-15 07:49:56  1.62KB 
/bin/sh -c #(nop) ADD file:eab2a6e196903da9dd3099aa5646b684ad933d1629d9ddaaebd29c0106635b03 in . 
                        
# 2023-06-15 07:49:56  0.00B 
/bin/sh -c #(nop) WORKDIR /rhapsody
                        
# 2023-06-15 07:49:56  0.00B 
/bin/sh -c #(nop)  ENV PYTHONPATH=/rhapsody/pythonDeps/lib/python3.8/site-packages:/rhapsody/pythonRhapsody/lib/python3.8/site-packages:/condaEnv/lib/python3.9/site-packages:
                        
# 2023-06-15 07:49:56  0.00B 
/bin/sh -c #(nop)  ENV PYTHONUSERBASE=/rhapsody/pythonDeps
                        
# 2023-06-15 07:49:56  0.00B 
/bin/sh -c #(nop)  ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/condaEnv/bin:/rhapsody/bin:/rhapsody/shell:/rhapsody/trinity:/rhapsody/pythonDeps/bin:/rhapsody/pythonRhapsody/bin:/rhapsody/rscript
                        
# 2023-06-15 07:49:54  1.43GB 
/bin/sh -c #(nop) COPY dir:9091273214b30864f333a19eda519de9940f7bf5d4d2643b57742738badd91a5 in /rhapsody/pythonDeps 
                        
# 2023-06-08 03:57:03  53.33KB 
/bin/sh -c echo "/condaEnv/lib" > /etc/ld.so.conf.d/condaEnv.conf      && ldconfig
                        
# 2023-06-08 03:57:01  881.11MB 
/bin/sh -c #(nop) COPY dir:bc0dcb32b7159ec2dabc2dca0b773918909ce67bf0ce4494e6c366c2354760b8 in /condaEnv 
                        
# 2023-06-08 03:56:46  0.00B 
/bin/sh -c #(nop)  ENV FONTCONFIG_FILE=/etc/fonts/fonts.conf
                        
# 2023-06-08 03:56:46  0.00B 
/bin/sh -c #(nop)  ENV FONTCONFIG_PATH=/etc/fonts
                        
# 2023-06-08 03:56:46  0.00B 
/bin/sh -c #(nop)  ENV LANG=en_US.utf8
                        
# 2023-06-08 03:56:45  497.39MB 
/bin/sh -c apt-get update      && apt-get install -y --no-install-recommends           fontconfig           libthreads-shared-perl           locales           python3           python3-distutils           default-jre           libxml2      && rm -rf /var/lib/apt/lists/*      && localedef -i en_US -c -f UTF-8 -A /usr/share/locale/locale.alias en_US.UTF-8
                        
# 2023-06-08 03:55:51  41.00B 
/bin/sh -c ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
                        
# 2023-06-08 03:55:51  0.00B 
/bin/sh -c #(nop)  ENV TZ=US/Pacific
                        
# 2023-04-13 21:05:15  0.00B 
/bin/sh -c #(nop)  CMD ["/bin/bash"]
                        
# 2023-04-13 21:05:15  72.79MB 
/bin/sh -c #(nop) ADD file:d05d1c0936b046937bd5755876db2f8da3ed8ccbcf464bb56c312fbc7ed78589 in / 
                        
# 2023-04-13 21:05:13  0.00B 
/bin/sh -c #(nop)  LABEL org.opencontainers.image.version=20.04
                        
# 2023-04-13 21:05:13  0.00B 
/bin/sh -c #(nop)  LABEL org.opencontainers.image.ref.name=ubuntu
                        
# 2023-04-13 21:05:13  0.00B 
/bin/sh -c #(nop)  ARG LAUNCHPAD_BUILD_ARCH
                        
# 2023-04-13 21:05:13  0.00B 
/bin/sh -c #(nop)  ARG RELEASE
                        
                    

镜像信息

{
    "Id": "sha256:ae8991f6abf72f18bfb7294582c26d3cfc20f8d58a7fdf150a797a6202ff0701",
    "RepoTags": [
        "bdgenomics/rhapsody:2.0",
        "swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody:2.0"
    ],
    "RepoDigests": [
        "bdgenomics/rhapsody@sha256:cee60927dea49ee03ca36abb67ca7d9b755d55a23dfd4e67e855d7e3a43b45e8",
        "swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bdgenomics/rhapsody@sha256:cee60927dea49ee03ca36abb67ca7d9b755d55a23dfd4e67e855d7e3a43b45e8"
    ],
    "Parent": "",
    "Comment": "",
    "Created": "2023-06-14T23:50:05.993831767Z",
    "Container": "",
    "ContainerConfig": null,
    "DockerVersion": "20.10.21",
    "Author": "",
    "Config": {
        "Hostname": "",
        "Domainname": "",
        "User": "",
        "AttachStdin": false,
        "AttachStdout": false,
        "AttachStderr": false,
        "Tty": false,
        "OpenStdin": false,
        "StdinOnce": false,
        "Env": [
            "PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/condaEnv/bin:/rhapsody/bin:/rhapsody/shell:/rhapsody/trinity:/rhapsody/pythonDeps/bin:/rhapsody/pythonRhapsody/bin:/rhapsody/rscript",
            "TZ=US/Pacific",
            "LANG=en_US.utf8",
            "FONTCONFIG_PATH=/etc/fonts",
            "FONTCONFIG_FILE=/etc/fonts/fonts.conf",
            "PYTHONUSERBASE=/rhapsody/pythonDeps",
            "PYTHONPATH=/rhapsody/pythonDeps/lib/python3.8/site-packages:/rhapsody/pythonRhapsody/lib/python3.8/site-packages:/condaEnv/lib/python3.9/site-packages:"
        ],
        "Cmd": [
            "/bin/bash"
        ],
        "Image": "sha256:5c56928de3c3beb0992500428f162cf19963e02534493d9eef4a001647cd79be",
        "Volumes": null,
        "WorkingDir": "/rhapsody",
        "Entrypoint": null,
        "OnBuild": null,
        "Labels": {
            "org.opencontainers.image.ref.name": "ubuntu",
            "org.opencontainers.image.version": "20.04"
        }
    },
    "Architecture": "amd64",
    "Os": "linux",
    "Size": 3070171077,
    "GraphDriver": {
        "Data": {
            "LowerDir": "/var/lib/docker/overlay2/5227e5477c0ff68ea628fc249d5b22e5e7d356978c297b289c0e46ec3e74105d/diff:/var/lib/docker/overlay2/133ac4cd366280738c76aebb65b67c13e47e800baec3b7f6aa41a6296cb77d15/diff:/var/lib/docker/overlay2/9dec90a7cd1f1ca5214570bbd9b969193951b2a97501caf0ae9d760240b9dab9/diff:/var/lib/docker/overlay2/8e10ec7f022af53f1260e16c9b2153c4dbe7884e50fb9c1d79696aa636f28742/diff:/var/lib/docker/overlay2/407db2e385fec9d16b2c8dba7c9937c0f2c117cf50a6d75bd7fe88402b018809/diff:/var/lib/docker/overlay2/af2ec6ad81c986cee382b9a2ae60a9c065831690454f76d6b575497cbf2bfce6/diff:/var/lib/docker/overlay2/5b82a368bde262b59880c7ff188915a8a7e82893e791fcff9fc2f30620bfe845/diff:/var/lib/docker/overlay2/b88293f21122648f9df0fd1e499f1484f3d6d4eb5397c2ce3155fe3486f5f066/diff:/var/lib/docker/overlay2/857065398df4fdb4b75e78f5a910bffe19aee22036429ed8d92fdd79a9c4758d/diff:/var/lib/docker/overlay2/ff25c76d9756d28ac29adc5295c417d3fbbbaa65a4e28eb973af6d2a31a2087f/diff:/var/lib/docker/overlay2/2f80436b25934200407e3cd615df567f1d0e8536d4363dd14fe7afeb4397e911/diff:/var/lib/docker/overlay2/52b0322728b0d93e22093a1ec5fc7cf9bbf5131a335754e66ea4cd94ac3cd242/diff:/var/lib/docker/overlay2/adaee846be7b9faa2c4b1131ccfd68d4f2b1be0663c8905a1ef89fddf90a21c1/diff:/var/lib/docker/overlay2/ad0fda3be30f42309667625a45f4198a9ad1e1695ae2cb3c0c10fc155bea34c6/diff:/var/lib/docker/overlay2/80cc6b9457870549d1b4e0bd9898a2b9881e1627be260d7eae274ea862b4d44b/diff:/var/lib/docker/overlay2/abe6d2242bba43478ce2f625e1874dc1372c053c88d1f3674be3d7eaf3f03442/diff:/var/lib/docker/overlay2/563b6e1d02b17ac98f1d8dfcbe3d2d5b9f0b2eeb60d9b55c95d3a5e93b11cdb1/diff:/var/lib/docker/overlay2/5b7b3b54681e0202591b68b1af39b1fac32d6b2b7323acfc2ac5a88c2c825528/diff",
            "MergedDir": "/var/lib/docker/overlay2/8d98887d14cd940519b7489a0707f97b1e0c11b649d4548d0c55c6532a9c2f8e/merged",
            "UpperDir": "/var/lib/docker/overlay2/8d98887d14cd940519b7489a0707f97b1e0c11b649d4548d0c55c6532a9c2f8e/diff",
            "WorkDir": "/var/lib/docker/overlay2/8d98887d14cd940519b7489a0707f97b1e0c11b649d4548d0c55c6532a9c2f8e/work"
        },
        "Name": "overlay2"
    },
    "RootFS": {
        "Type": "layers",
        "Layers": [
            "sha256:6f37ca73c74f2cef0ddefd960260f2033c16c84583c5507a4f37b1cf7631dc20",
            "sha256:964246bbe2d99d9ae72f6a41e65da5dfc41c58245caaacab29c2cea7c45c5236",
            "sha256:61c3b3fe6c677b9a76df6c16746909b5985238652c946224a3f5cb4da66e32f4",
            "sha256:53af9125da11d51264e180b3149bdfbc9ae9768fc886e8da037cf2057aeaaf93",
            "sha256:af8aae129be86cccb55106a3caee4027af3d6b2bd79dacef032038a332e93211",
            "sha256:6d17e54409f8f73d45406bfa23c56e56f20316ddd5ab8a79eb280867ce1a4ca5",
            "sha256:5349c2750c487f90bfc3acff6ac5cb137799670ad4e368c0f36ada6b6e77377c",
            "sha256:761392a83b769f5af17a7e7ab776b6617c1abe45a55474bc1ee77dd0ced49af6",
            "sha256:4d5e4065e3bcc8ddfcc3f43d5f9b8c618a1085e7f81595d66aedd2cff68e44bc",
            "sha256:d5771987a2c19b164a44c138745d1d764f4167412b46cb8be5d27f8912d40061",
            "sha256:095bba8ae7515274c487248aab011d40489ce761fe0fc7904ef2b84e686a3bcc",
            "sha256:fbb16e88009a75e506e1c5c1b64efd011b1e285c0c28488912c0c5dbde8c2611",
            "sha256:7d8509597798aabc07f6f976196d553dccbcc22f2581c5e4876bf94dd640f7fa",
            "sha256:9fa9f084e062b6c9ad01a984c1c5e76836df5b9719e1a2962b8ea7aa7b5900c6",
            "sha256:8e895f9e100906dd4ad9247e62c9e8c511584d193edbcb002e47bf12cd509949",
            "sha256:50e7d17eb2569042fc6e38285ed82f8eec0434f569560f0ba35205bb3549ceaf",
            "sha256:88ee995a2d7d568c815df28e1758ead9019e6e451ee0901da9a8cfeeb2760cba",
            "sha256:3f17854fbd59d06cca299724fdf5093bf3730d7e04ef31211d6e4f9504af9f41",
            "sha256:5571161239a8737db569a82cdd975b82b358466f7b91df745fd455eb824f2c69"
        ]
    },
    "Metadata": {
        "LastTagTime": "2025-05-31T12:51:53.961918964+08:00"
    }
}

更多版本

docker.io/bdgenomics/rhapsody:2.0

linux/amd64 docker.io3.07GB2025-05-31 12:54
16