docker.io/bioconductor/bioconductor_docker:latest linux/amd64

docker.io/bioconductor/bioconductor_docker:latest - 国内下载镜像源 浏览次数:12 xy3666 贡献同步

温馨提示:此镜像为latest tag镜像，本站无法保证此版本为最新镜像

Bioconductor Docker镜像是Bioconductor官方提供的标准化生物信息学分析环境镜像，包含Bioconductor核心软件包、相关依赖库及常用工具，支持生物数据的处理、分析与可视化等任务，可帮助用户快速部署一致的生物信息学工作环境，避免手动配置依赖的繁琐。

源镜像 docker.io/bioconductor/bioconductor_docker:latest
国内镜像 swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest
镜像ID sha256:08d4a7960831b3654769148090306762fdc287e39fe6293e837137b376ee81a0
镜像TAG latest
大小 4.80GB
镜像源 docker.io
项目信息 Docker-Hub主页 🚀项目TAG 🚀
CMD /init
启动入口
工作目录
OS/平台 linux/amd64
浏览量 12 次
贡献者
avatar
xy3666
镜像创建 2026-05-13T22:52:25.262192528Z
同步时间 2026-05-26 16:55
开放端口
8787/tcp
环境变量
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin R_VERSION=4.6.0 R_HOME=/usr/local/lib/R TZ=Etc/UTC CRAN=https://p3m.dev/cran/__linux__/noble/latest LANG=en_US.UTF-8 S6_VERSION=v2.1.0.2 RSTUDIO_VERSION=2026.04.0+526 DEFAULT_USER=rstudio BIOCONDUCTOR_USE_CONTAINER_REPOSITORY=TRUE TARGETARCH=amd64 TARGETPLATFORM=linux/amd64 PLATFORM=linux/amd64 LIBSBML_CFLAGS=-I/usr/include LIBSBML_LIBS=-lsbml BIOCONDUCTOR_DOCKER_VERSION=3.23.3 BIOCONDUCTOR_VERSION=3.23 BIOCONDUCTOR_NAME=bioconductor_docker
镜像标签
Bioconductor docker image with system dependencies to install all packages.: description Artistic-2.0: license maintainer@bioconductor.org: maintainer bioconductor/bioconductor_docker: name Carl Boettiger <cboettig@ropensci.org>: org.opencontainers.image.authors docker.io/library/ubuntu:noble: org.opencontainers.image.base.name 2026-05-13T22:48:46.259Z: org.opencontainers.image.created Docker Containers for Bioconductor: org.opencontainers.image.description Artistic-2.0: org.opencontainers.image.licenses bb5870892eb7d3cb6c25561c95242d26e2d72cc1: org.opencontainers.image.revision https://github.com/Bioconductor/bioconductor_docker: org.opencontainers.image.source bioconductor_docker: org.opencontainers.image.title https://github.com/Bioconductor/bioconductor_docker: org.opencontainers.image.url Rocker Project: org.opencontainers.image.vendor RELEASE_3_23: org.opencontainers.image.version https://github.com/Bioconductor/bioconductor_docker: url Bioconductor Project: vendor 3.23.3: version
无权限下载?点我修复 生成Docker Run命令 生成Kubernetes YAML资源

Docker拉取命令 

docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest
docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest  docker.io/bioconductor/bioconductor_docker:latest

Containerd拉取命令 

ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest
ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest  docker.io/bioconductor/bioconductor_docker:latest

Shell快速替换命令 

sed -i 's#bioconductor/bioconductor_docker:latest#swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest#' deployment.yaml

Ansible快速分发-Docker 

#ansible k8s -m shell -a 'docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest && docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest  docker.io/bioconductor/bioconductor_docker:latest'

Ansible快速分发-Containerd 

#ansible k8s -m shell -a 'ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest && ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest  docker.io/bioconductor/bioconductor_docker:latest'

镜像构建历史 


# 2026-05-14 06:52:25  0.00B 设置默认要执行的命令
CMD ["/init"]
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 BIOCONDUCTOR_NAME
ENV BIOCONDUCTOR_NAME=bioconductor_docker
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 BIOCONDUCTOR_VERSION
ENV BIOCONDUCTOR_VERSION=3.23
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 BIOCONDUCTOR_DOCKER_VERSION
ENV BIOCONDUCTOR_DOCKER_VERSION=3.23.3
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 LIBSBML_LIBS
ENV LIBSBML_LIBS=-lsbml
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 LIBSBML_CFLAGS
ENV LIBSBML_CFLAGS=-I/usr/include
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 PLATFORM
ENV PLATFORM=linux/amd64
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 TARGETARCH
ENV TARGETARCH=amd64
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG TARGETARCH=amd64
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 TARGETPLATFORM
ENV TARGETPLATFORM=linux/amd64
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG TARGETPLATFORM=linux/amd64
                        
# 2026-05-14 06:52:25  0.00B 添加元数据标签
LABEL name=bioconductor/bioconductor_docker version=3.23.3 url=https://github.com/Bioconductor/bioconductor_docker vendor=Bioconductor Project maintainer=maintainer@bioconductor.org description=Bioconductor docker image with system dependencies to install all packages. license=Artistic-2.0
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG BIOCONDUCTOR_DOCKER_VERSION=3.23.3
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG BIOCONDUCTOR_PATCH=3
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG BIOCONDUCTOR_VERSION=3.23
                        
# 2026-05-14 06:52:25  2.31GB 复制新文件或目录到容器中
COPY / / # buildkit
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 TARGETARCH
ENV TARGETARCH=amd64
                        
# 2026-05-14 06:52:25  0.00B 定义构建参数
ARG TARGETARCH=amd64
                        
# 2026-05-14 06:52:25  0.00B 设置环境变量 BIOCONDUCTOR_USE_CONTAINER_REPOSITORY
ENV BIOCONDUCTOR_USE_CONTAINER_REPOSITORY=TRUE
                        
# 2026-04-24 21:44:59  50.15KB 复制新文件或目录到容器中
COPY scripts /rocker_scripts # buildkit
                        
# 2026-04-24 21:44:59  1.92MB 执行命令并创建新的镜像层
RUN /bin/sh -c /rocker_scripts/install_quarto.sh # buildkit
                        
# 2026-04-24 21:44:56  2.49KB 复制新文件或目录到容器中
COPY scripts/install_quarto.sh /rocker_scripts/install_quarto.sh # buildkit
                        
# 2026-04-24 21:44:56  163.05MB 执行命令并创建新的镜像层
RUN /bin/sh -c /rocker_scripts/install_pandoc.sh # buildkit
                        
# 2026-04-24 21:44:52  3.35KB 复制新文件或目录到容器中
COPY scripts/install_pandoc.sh /rocker_scripts/install_pandoc.sh # buildkit
                        
# 2026-04-24 21:44:52  0.00B 设置默认要执行的命令
CMD ["/init"]
                        
# 2026-04-24 21:44:52  0.00B 声明容器运行时监听的端口
EXPOSE [8787/tcp]
                        
# 2026-04-24 21:44:52  1.38GB 执行命令并创建新的镜像层
RUN /bin/sh -c /rocker_scripts/install_rstudio.sh # buildkit
                        
# 2026-04-24 21:44:09  297.00B 复制新文件或目录到容器中
COPY scripts/pam-helper.sh /rocker_scripts/pam-helper.sh # buildkit
                        
# 2026-04-24 21:44:09  8.10KB 复制新文件或目录到容器中
COPY scripts/init_userconf.sh /rocker_scripts/init_userconf.sh # buildkit
                        
# 2026-04-24 21:44:09  614.00B 复制新文件或目录到容器中
COPY scripts/init_set_env.sh /rocker_scripts/init_set_env.sh # buildkit
                        
# 2026-04-24 21:44:09  1.14KB 复制新文件或目录到容器中
COPY scripts/default_user.sh /rocker_scripts/default_user.sh # buildkit
                        
# 2026-04-24 21:44:09  1.19KB 复制新文件或目录到容器中
COPY scripts/install_s6init.sh /rocker_scripts/install_s6init.sh # buildkit
                        
# 2026-04-24 21:44:09  4.36KB 复制新文件或目录到容器中
COPY scripts/install_rstudio.sh /rocker_scripts/install_rstudio.sh # buildkit
                        
# 2026-04-24 19:43:56  0.00B 设置环境变量 DEFAULT_USER
ENV DEFAULT_USER=rstudio
                        
# 2026-04-24 19:43:56  0.00B 设置环境变量 RSTUDIO_VERSION
ENV RSTUDIO_VERSION=2026.04.0+526
                        
# 2026-04-24 19:43:56  0.00B 设置环境变量 S6_VERSION
ENV S6_VERSION=v2.1.0.2
                        
# 2026-04-24 19:43:56  109.03MB 执行命令并创建新的镜像层
RUN /bin/sh -c if grep -q "1000" /etc/passwd; then
    userdel --remove "$(id -un 1000)";
fi
/rocker_scripts/setup_R.sh
 # buildkit
                        
# 2026-04-24 19:43:30  3.12KB 复制新文件或目录到容器中
COPY scripts/setup_R.sh /rocker_scripts/setup_R.sh # buildkit
                        
# 2026-04-24 19:43:30  6.96KB 复制新文件或目录到容器中
COPY scripts/bin/ /rocker_scripts/bin/ # buildkit
                        
# 2026-04-24 19:43:30  0.00B 设置环境变量 LANG
ENV LANG=en_US.UTF-8
                        
# 2026-04-24 19:43:30  0.00B 设置环境变量 CRAN
ENV CRAN=https://p3m.dev/cran/__linux__/noble/latest
                        
# 2026-04-24 19:43:30  757.93MB 执行命令并创建新的镜像层
RUN /bin/sh -c /rocker_scripts/install_R_source.sh # buildkit
                        
# 2026-04-22 05:01:36  4.19KB 复制新文件或目录到容器中
COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit
                        
# 2026-04-22 05:01:36  0.00B 设置环境变量 TZ
ENV TZ=Etc/UTC
                        
# 2026-04-22 05:01:36  0.00B 设置环境变量 R_HOME
ENV R_HOME=/usr/local/lib/R
                        
# 2026-04-22 05:01:36  0.00B 设置环境变量 R_VERSION
ENV R_VERSION=4.6.0
                        
# 2026-04-10 14:49:18  0.00B 
/bin/sh -c #(nop)  CMD ["/bin/bash"]
                        
# 2026-04-10 14:49:17  78.14MB 
/bin/sh -c #(nop) ADD file:8ce1caf246e7c778bca84c516d02fd4e83766bb2c530a0fffa8a351b560a2728 in / 
                        
# 2026-04-10 14:49:15  0.00B 
/bin/sh -c #(nop)  LABEL org.opencontainers.image.version=24.04
                        
# 2026-04-10 14:49:15  0.00B 
/bin/sh -c #(nop)  ARG LAUNCHPAD_BUILD_ARCH
                        
# 2026-04-10 14:49:15  0.00B 
/bin/sh -c #(nop)  ARG RELEASE

镜像信息 

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    "Id": "sha256:08d4a7960831b3654769148090306762fdc287e39fe6293e837137b376ee81a0",
    "RepoTags": [
        "bioconductor/bioconductor_docker:latest",
        "swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker:latest"
    ],
    "RepoDigests": [
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        "swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/bioconductor/bioconductor_docker@sha256:5aacd241e29d148e191b9cba586ccbae1e8447a49c7323929bd522a88ba77897"
    ],
    "Parent": "",
    "Comment": "buildkit.dockerfile.v0",
    "Created": "2026-05-13T22:52:25.262192528Z",
    "Container": "",
    "ContainerConfig": null,
    "DockerVersion": "",
    "Author": "",
    "Config": {
        "Hostname": "",
        "Domainname": "",
        "User": "",
        "AttachStdin": false,
        "AttachStdout": false,
        "AttachStderr": false,
        "ExposedPorts": {
            "8787/tcp": {}
        },
        "Tty": false,
        "OpenStdin": false,
        "StdinOnce": false,
        "Env": [
            "PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin",
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            "R_HOME=/usr/local/lib/R",
            "TZ=Etc/UTC",
            "CRAN=https://p3m.dev/cran/__linux__/noble/latest",
            "LANG=en_US.UTF-8",
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            "DEFAULT_USER=rstudio",
            "BIOCONDUCTOR_USE_CONTAINER_REPOSITORY=TRUE",
            "TARGETARCH=amd64",
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            "PLATFORM=linux/amd64",
            "LIBSBML_CFLAGS=-I/usr/include",
            "LIBSBML_LIBS=-lsbml",
            "BIOCONDUCTOR_DOCKER_VERSION=3.23.3",
            "BIOCONDUCTOR_VERSION=3.23",
            "BIOCONDUCTOR_NAME=bioconductor_docker"
        ],
        "Cmd": [
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        "ArgsEscaped": true,
        "Image": "",
        "Volumes": null,
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        "Entrypoint": null,
        "OnBuild": null,
        "Labels": {
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            "license": "Artistic-2.0",
            "maintainer": "maintainer@bioconductor.org",
            "name": "bioconductor/bioconductor_docker",
            "org.opencontainers.image.authors": "Carl Boettiger \u003ccboettig@ropensci.org\u003e",
            "org.opencontainers.image.base.name": "docker.io/library/ubuntu:noble",
            "org.opencontainers.image.created": "2026-05-13T22:48:46.259Z",
            "org.opencontainers.image.description": "Docker Containers for Bioconductor",
            "org.opencontainers.image.licenses": "Artistic-2.0",
            "org.opencontainers.image.revision": "bb5870892eb7d3cb6c25561c95242d26e2d72cc1",
            "org.opencontainers.image.source": "https://github.com/Bioconductor/bioconductor_docker",
            "org.opencontainers.image.title": "bioconductor_docker",
            "org.opencontainers.image.url": "https://github.com/Bioconductor/bioconductor_docker",
            "org.opencontainers.image.vendor": "Rocker Project",
            "org.opencontainers.image.version": "RELEASE_3_23",
            "url": "https://github.com/Bioconductor/bioconductor_docker",
            "vendor": "Bioconductor Project",
            "version": "3.23.3"
        }
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    "Architecture": "amd64",
    "Os": "linux",
    "Size": 4795227537,
    "GraphDriver": {
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    }
}

更多版本

docker.io/bioconductor/bioconductor_docker:latest

linux/amd64 docker.io4.80GB2026-05-26 16:55
11