docker.io/snakemake/snakemake:v9.9.0 linux/amd64

docker.io/snakemake/snakemake:v9.9.0 - 国内下载镜像源 浏览次数:18

这是一个包含Snakemake工作流程管理系统的Docker镜像。Snakemake是一个用于构建可重复数据分析工作流程的工具,它使用Python编写,并支持多种计算资源和文件系统。该镜像提供了一种方便的方式来运行Snakemake工作流程,而无需在本地系统上安装Snakemake及其依赖项。

源镜像 docker.io/snakemake/snakemake:v9.9.0
国内镜像 swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0
镜像ID sha256:0f300f80013cd520678d147f0c0f178c6a335453a7e4eb818c3a4da3a2e45a98
镜像TAG v9.9.0
大小 4.50GB
镜像源 docker.io
项目信息 Docker-Hub主页 🚀项目TAG 🚀
CMD /bin/bash
启动入口 /usr/local/bin/_entrypoint.sh
工作目录 /tmp/repo
OS/平台 linux/amd64
浏览量 18 次
贡献者
镜像创建 2025-07-29T16:13:10.41262764Z
同步时间 2025-08-21 13:04
更新时间 2025-08-26 01:25
环境变量
PATH=/opt/conda/envs/snakemake/bin:/opt/conda/envs/apptainer/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=57439 LANG=C.UTF-8 LC_ALL=C.UTF-8 ENV_NAME=base MAMBA_ROOT_PREFIX=/opt/conda MAMBA_EXE=/bin/micromamba CONDA_OVERRIDE_CUDA= SHELL=/bin/bash APT_PKGS=bzip2 ca-certificates curl wget gnupg2 squashfs-tools git
镜像标签
debian: distro_id Johannes Köster <johannes.koester@tu-dortmund.de>: org.opencontainers.image.authors 2025-07-28T20:48:47.218Z: org.opencontainers.image.created Rapid builds of small Conda-based containers using micromamba.: org.opencontainers.image.description Apache-2.0: org.opencontainers.image.licenses 60cbdadd7d8b55f83bc5817ea06f16efa78c88c2: org.opencontainers.image.revision https://github.com/mamba-org/micromamba-docker: org.opencontainers.image.source micromamba-docker: org.opencontainers.image.title https://github.com/mamba-org/micromamba-docker: org.opencontainers.image.url latest: org.opencontainers.image.version

Docker拉取命令

docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0
docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0  docker.io/snakemake/snakemake:v9.9.0

Containerd拉取命令

ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0
ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0  docker.io/snakemake/snakemake:v9.9.0

Shell快速替换命令

sed -i 's#snakemake/snakemake:v9.9.0#swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0#' deployment.yaml

Ansible快速分发-Docker

#ansible k8s -m shell -a 'docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0 && docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0  docker.io/snakemake/snakemake:v9.9.0'

Ansible快速分发-Containerd

#ansible k8s -m shell -a 'ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0 && ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/docker.io/snakemake/snakemake:v9.9.0  docker.io/snakemake/snakemake:v9.9.0'

镜像构建历史


# 2025-07-30 00:13:10  212.81MB 执行命令并创建新的镜像层
RUN /usr/local/bin/_dockerfile_shell.sh pip install .[reports,messaging,pep] # buildkit
                        
# 2025-07-30 00:12:56  0.00B 设置环境变量 PATH
ENV PATH=/opt/conda/envs/snakemake/bin:/opt/conda/envs/apptainer/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
                        
# 2025-07-30 00:12:56  473.94MB 执行命令并创建新的镜像层
RUN /usr/local/bin/_dockerfile_shell.sh micromamba create -q -y -c bioconda -c conda-forge -n snakemake     snakemake-minimal --only-deps &&     eval "$(micromamba shell hook --shell bash)" &&     micromamba activate /opt/conda/envs/snakemake &&     micromamba install -c conda-forge conda &&     micromamba clean --all -y # buildkit
                        
# 2025-07-30 00:12:38  1.07GB 执行命令并创建新的镜像层
RUN /usr/local/bin/_dockerfile_shell.sh micromamba create -q -y -c conda-forge -n apptainer apptainer # buildkit
                        
# 2025-07-30 00:12:26  103.86MB 执行命令并创建新的镜像层
RUN /usr/local/bin/_dockerfile_shell.sh apt-get update     && apt-get install -y --no-install-recommends ${APT_PKGS}     && apt-get clean     && rm -rf /var/lib/apt /var/lib/dpkg /var/lib/cache /var/lib/log # buildkit
                        
# 2025-07-30 00:12:18  0.00B 设置环境变量 APT_PKGS
ENV APT_PKGS=bzip2 ca-certificates curl wget gnupg2 squashfs-tools git
                        
# 2025-07-30 00:12:18  0.00B 指定运行容器时使用的用户
USER root
                        
# 2025-07-30 00:12:18  0.00B 设置环境变量 SHELL
ENV SHELL=/bin/bash
                        
# 2025-07-30 00:12:18  0.00B 设置环境变量 LANG
ENV LANG=C.UTF-8
                        
# 2025-07-30 00:12:18  0.00B 设置工作目录为/tmp/repo
WORKDIR /tmp/repo
                        
# 2025-07-30 00:12:18  2.55GB 复制文件或目录到容器中
ADD . /tmp/repo # buildkit
                        
# 2025-07-30 00:12:18  0.00B 添加元数据标签
LABEL org.opencontainers.image.authors=Johannes Köster <johannes.koester@tu-dortmund.de>
                        
# 2025-07-29 04:49:18  0.00B 
SHELL [/usr/local/bin/_dockerfile_shell.sh]
                        
# 2025-07-29 04:49:18  222.00B 复制新文件或目录到容器中
COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit
                        
# 2025-07-29 04:49:18  0.00B 设置默认要执行的命令
CMD ["/bin/bash"]
                        
# 2025-07-29 04:49:18  0.00B 配置容器启动时运行的命令
ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]
                        
# 2025-07-29 04:49:18  1.07KB 复制新文件或目录到容器中
COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit
                        
# 2025-07-29 04:49:18  866.00B 复制新文件或目录到容器中
COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit
                        
# 2025-07-29 04:49:18  0.00B 设置工作目录为/tmp
WORKDIR /tmp
                        
# 2025-07-29 04:49:18  0.00B 指定运行容器时使用的用户
USER mambauser
                        
# 2025-07-29 04:49:18  13.18KB 执行命令并创建新的镜像层
RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=57439 /bin/sh -c /usr/local/bin/_dockerfile_initialize_user_accounts.sh     && /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit
                        
# 2025-07-29 04:49:18  112.00B 复制新文件或目录到容器中
COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit
                        
# 2025-07-29 04:49:18  818.00B 复制新文件或目录到容器中
COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit
                        
# 2025-07-29 04:49:18  216.59KB 复制新文件或目录到容器中
COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit
                        
# 2025-07-29 04:49:17  17.02MB 复制新文件或目录到容器中
COPY /bin/micromamba /bin/micromamba # buildkit
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 CONDA_OVERRIDE_CUDA
ENV CONDA_OVERRIDE_CUDA=
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 MAMBA_EXE
ENV MAMBA_EXE=/bin/micromamba
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 MAMBA_ROOT_PREFIX
ENV MAMBA_ROOT_PREFIX=/opt/conda
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 ENV_NAME
ENV ENV_NAME=base
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 LANG LC_ALL
ENV LANG=C.UTF-8 LC_ALL=C.UTF-8
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 MAMBA_USER_GID
ENV MAMBA_USER_GID=57439
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 MAMBA_USER_ID
ENV MAMBA_USER_ID=57439
                        
# 2025-07-29 04:49:17  0.00B 设置环境变量 MAMBA_USER
ENV MAMBA_USER=mambauser
                        
# 2025-07-29 04:49:17  0.00B 定义构建参数
ARG MAMBA_USER_GID=57439
                        
# 2025-07-29 04:49:17  0.00B 定义构建参数
ARG MAMBA_USER_ID=57439
                        
# 2025-07-29 04:49:17  0.00B 定义构建参数
ARG MAMBA_USER=mambauser
                        
# 2025-07-29 04:49:17  0.00B 定义构建参数
ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt
                        
# 2025-07-21 08:00:00  74.81MB 
# debian.sh --arch 'amd64' out/ 'bookworm' '@1753056000'
                        
                    

镜像信息

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    "Id": "sha256:0f300f80013cd520678d147f0c0f178c6a335453a7e4eb818c3a4da3a2e45a98",
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    "Comment": "buildkit.dockerfile.v0",
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        "Tty": false,
        "OpenStdin": false,
        "StdinOnce": false,
        "Env": [
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            "MAMBA_USER=mambauser",
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        "Labels": {
            "distro_id": "debian",
            "org.opencontainers.image.authors": "Johannes Köster \u003cjohannes.koester@tu-dortmund.de\u003e",
            "org.opencontainers.image.created": "2025-07-28T20:48:47.218Z",
            "org.opencontainers.image.description": "Rapid builds of small Conda-based containers using micromamba.",
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            "org.opencontainers.image.source": "https://github.com/mamba-org/micromamba-docker",
            "org.opencontainers.image.title": "micromamba-docker",
            "org.opencontainers.image.url": "https://github.com/mamba-org/micromamba-docker",
            "org.opencontainers.image.version": "latest"
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    "Architecture": "amd64",
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}

更多版本

docker.io/snakemake/snakemake:v9.9.0

linux/amd64 docker.io4.50GB2025-08-21 13:04
17