ghcr.io/moshi4/pygenomeviz:latest linux/amd64

ghcr.io/moshi4/pygenomeviz:latest - 国内下载镜像源 浏览次数:11

温馨提示:此镜像为latest tag镜像,本站无法保证此版本为最新镜像

pygenomeviz镜像封装了PyGenomeViz工具,这是一个用于基因组比较可视化的Python库,支持绘制线性基因组比较图、环形基因组图等,可直观展示基因组间的同源区域、基因结构等信息,无需手动配置依赖环境,能直接在容器中运行相关分析与可视化任务。

源镜像 ghcr.io/moshi4/pygenomeviz:latest
国内镜像 swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest
镜像ID sha256:0a830c7d547d6e7d1ee7d316bfd1f1946c3b8f41f9287401fab1828ad8a03cb0
镜像TAG latest
大小 893.62MB
镜像源 ghcr.io
CMD /bin/bash
启动入口
工作目录
OS/平台 linux/amd64
浏览量 11 次
贡献者
镜像创建 2025-05-13T15:41:24.48602018Z
同步时间 2026-02-26 10:15
环境变量
PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LANG=C.UTF-8 GPG_KEY=7169605F62C751356D054A26A821E680E5FA6305 PYTHON_VERSION=3.12.10 PYTHON_SHA256=07ab697474595e06f06647417d3c7fa97ded07afc1a7e4454c5639919b46eaea

Docker拉取命令

docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest
docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest  ghcr.io/moshi4/pygenomeviz:latest

Containerd拉取命令

ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest
ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest  ghcr.io/moshi4/pygenomeviz:latest

Shell快速替换命令

sed -i 's#ghcr.io/moshi4/pygenomeviz:latest#swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest#' deployment.yaml

Ansible快速分发-Docker

#ansible k8s -m shell -a 'docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest && docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest  ghcr.io/moshi4/pygenomeviz:latest'

Ansible快速分发-Containerd

#ansible k8s -m shell -a 'ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest && ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/moshi4/pygenomeviz:latest  ghcr.io/moshi4/pygenomeviz:latest'

镜像构建历史


# 2025-05-13 23:41:24  0.00B 设置默认要执行的命令
CMD ["/bin/bash"]
                        
# 2025-05-13 23:41:24  12.21MB 执行命令并创建新的镜像层
RUN /bin/sh -c pgv-download yersinia_phage --cache_only &&     pgv-download mycoplasma_mycoides --cache_only # buildkit
                        
# 2025-05-13 23:41:21  492.25MB 执行命令并创建新的镜像层
RUN /bin/sh -c pip install -U pip &&     pip install pygenomeviz[gui] --no-cache-dir # buildkit
                        
# 2025-05-13 23:40:59  264.91MB 执行命令并创建新的镜像层
RUN /bin/sh -c apt-get update &&     apt-get install -y ncbi-blast+ mummer mmseqs2 progressivemauve # buildkit
                        
# 2025-05-09 06:27:23  0.00B 设置默认要执行的命令
CMD ["python3"]
                        
# 2025-05-09 06:27:23  36.00B 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	for src in idle3 pip3 pydoc3 python3 python3-config; do 		dst="$(echo "$src" | tr -d 3)"; 		[ -s "/usr/local/bin/$src" ]; 		[ ! -e "/usr/local/bin/$dst" ]; 		ln -svT "$src" "/usr/local/bin/$dst"; 	done # buildkit
                        
# 2025-05-09 06:27:23  40.19MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 		savedAptMark="$(apt-mark showmanual)"; 	apt-get update; 	apt-get install -y --no-install-recommends 		dpkg-dev 		gcc 		gnupg 		libbluetooth-dev 		libbz2-dev 		libc6-dev 		libdb-dev 		libffi-dev 		libgdbm-dev 		liblzma-dev 		libncursesw5-dev 		libreadline-dev 		libsqlite3-dev 		libssl-dev 		make 		tk-dev 		uuid-dev 		wget 		xz-utils 		zlib1g-dev 	; 		wget -O python.tar.xz "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz"; 	echo "$PYTHON_SHA256 *python.tar.xz" | sha256sum -c -; 	wget -O python.tar.xz.asc "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz.asc"; 	GNUPGHOME="$(mktemp -d)"; export GNUPGHOME; 	gpg --batch --keyserver hkps://keys.openpgp.org --recv-keys "$GPG_KEY"; 	gpg --batch --verify python.tar.xz.asc python.tar.xz; 	gpgconf --kill all; 	rm -rf "$GNUPGHOME" python.tar.xz.asc; 	mkdir -p /usr/src/python; 	tar --extract --directory /usr/src/python --strip-components=1 --file python.tar.xz; 	rm python.tar.xz; 		cd /usr/src/python; 	gnuArch="$(dpkg-architecture --query DEB_BUILD_GNU_TYPE)"; 	./configure 		--build="$gnuArch" 		--enable-loadable-sqlite-extensions 		--enable-optimizations 		--enable-option-checking=fatal 		--enable-shared 		$(test "$gnuArch" != 'riscv64-linux-musl' && echo '--with-lto') 		--with-ensurepip 	; 	nproc="$(nproc)"; 	EXTRA_CFLAGS="$(dpkg-buildflags --get CFLAGS)"; 	LDFLAGS="$(dpkg-buildflags --get LDFLAGS)"; 	LDFLAGS="${LDFLAGS:--Wl},--strip-all"; 		arch="$(dpkg --print-architecture)"; arch="${arch##*-}"; 		case "$arch" in 			amd64|arm64) 				EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer"; 				;; 			i386) 				;; 			*) 				EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer"; 				;; 		esac; 	make -j "$nproc" 		"EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" 		"LDFLAGS=${LDFLAGS:-}" 	; 	rm python; 	make -j "$nproc" 		"EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" 		"LDFLAGS=${LDFLAGS:--Wl},-rpath='\$\$ORIGIN/../lib'" 		python 	; 	make install; 		cd /; 	rm -rf /usr/src/python; 		find /usr/local -depth 		\( 			\( -type d -a \( -name test -o -name tests -o -name idle_test \) \) 			-o \( -type f -a \( -name '*.pyc' -o -name '*.pyo' -o -name 'libpython*.a' \) \) 		\) -exec rm -rf '{}' + 	; 		ldconfig; 		apt-mark auto '.*' > /dev/null; 	apt-mark manual $savedAptMark; 	find /usr/local -type f -executable -not \( -name '*tkinter*' \) -exec ldd '{}' ';' 		| awk '/=>/ { so = $(NF-1); if (index(so, "/usr/local/") == 1) { next }; gsub("^/(usr/)?", "", so); printf "*%s\n", so }' 		| sort -u 		| xargs -r dpkg-query --search 		| cut -d: -f1 		| sort -u 		| xargs -r apt-mark manual 	; 	apt-get purge -y --auto-remove -o APT::AutoRemove::RecommendsImportant=false; 	rm -rf /var/lib/apt/lists/*; 		export PYTHONDONTWRITEBYTECODE=1; 	python3 --version; 	pip3 --version # buildkit
                        
# 2025-05-09 06:27:23  0.00B 设置环境变量 PYTHON_SHA256
ENV PYTHON_SHA256=07ab697474595e06f06647417d3c7fa97ded07afc1a7e4454c5639919b46eaea
                        
# 2025-05-09 06:27:23  0.00B 设置环境变量 PYTHON_VERSION
ENV PYTHON_VERSION=3.12.10
                        
# 2025-05-09 06:27:23  0.00B 设置环境变量 GPG_KEY
ENV GPG_KEY=7169605F62C751356D054A26A821E680E5FA6305
                        
# 2025-05-09 06:27:23  9.23MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	apt-get update; 	apt-get install -y --no-install-recommends 		ca-certificates 		netbase 		tzdata 	; 	rm -rf /var/lib/apt/lists/* # buildkit
                        
# 2025-05-09 06:27:23  0.00B 设置环境变量 LANG
ENV LANG=C.UTF-8
                        
# 2025-05-09 06:27:23  0.00B 设置环境变量 PATH
ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
                        
# 2025-04-28 08:00:00  74.83MB 
# debian.sh --arch 'amd64' out/ 'bookworm' '@1745798400'
                        
                    

镜像信息

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更多版本

ghcr.io/moshi4/pygenomeviz:latest

linux/amd64 ghcr.io893.62MB2026-02-26 10:15
10