ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev linux/amd64

ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev - 国内下载镜像源 浏览次数:22

温馨提示:此镜像为latest tag镜像,本站无法保证此版本为最新镜像

scvi-tools是一个用于单细胞基因组学数据分析的Python库,提供基于深度生成模型的工具,可实现细胞类型注释、批次效应校正、轨迹推断、基因调控网络分析等功能,支持scRNA-seq、ATAC-seq等多种单细胞组学数据类型,助力研究人员从单细胞数据中挖掘生物学信息。

源镜像 ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev
国内镜像 swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev
镜像ID sha256:715918ce32cf5e080399780b5e96371e13b1e753759bf47f90e9c3e79a67de89
镜像TAG py3.13-cu12-latest-dev
大小 8.18GB
镜像源 ghcr.io
CMD /bin/bash
启动入口
工作目录
OS/平台 linux/amd64
浏览量 22 次
贡献者
镜像创建 2026-05-19T06:28:19.264354804Z
同步时间 2026-05-22 00:32
环境变量
PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LANG=C.UTF-8 GPG_KEY=7169605F62C751356D054A26A821E680E5FA6305 PYTHON_VERSION=3.12.13 PYTHON_SHA256=c08bc65a81971c1dd5783182826503369466c7e67374d1646519adf05207b684 SCVI_PATH=/usr/local/lib/python3.12/site-packages/scvi-tools

Docker拉取命令

docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev
docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev  ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev

Containerd拉取命令

ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev
ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev  ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev

Shell快速替换命令

sed -i 's#ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev#swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev#' deployment.yaml

Ansible快速分发-Docker

#ansible k8s -m shell -a 'docker pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev && docker tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev  ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev'

Ansible快速分发-Containerd

#ansible k8s -m shell -a 'ctr images pull swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev && ctr images tag  swr.cn-north-4.myhuaweicloud.com/ddn-k8s/ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev  ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev'

镜像构建历史


# 2026-05-19 14:28:19  2.07GB 执行命令并创建新的镜像层
RUN |1 DEPENDENCIES=dev /bin/sh -c uv pip install --system "scvi-tools[${DEPENDENCIES}] @ ${SCVI_PATH}" # buildkit
                        
# 2026-05-19 14:28:04  0.00B 定义构建参数
ARG DEPENDENCIES=dev
                        
# 2026-05-19 14:28:04  51.78MB 复制新文件或目录到容器中
COPY . /usr/local/lib/python3.12/site-packages/scvi-tools # buildkit
                        
# 2026-05-19 14:28:04  0.00B 设置环境变量 SCVI_PATH
ENV SCVI_PATH=/usr/local/lib/python3.12/site-packages/scvi-tools
                        
# 2026-05-19 14:28:04  0.00B 设置默认要执行的命令
CMD ["/bin/bash"]
                        
# 2026-05-19 14:28:04  4.89GB 执行命令并创建新的镜像层
RUN /bin/sh -c uv pip install --system --no-cache torch torchvision torchaudio # buildkit
                        
# 2026-05-19 14:27:44  68.23MB 执行命令并创建新的镜像层
RUN /bin/sh -c pip install --no-cache-dir uv # buildkit
                        
# 2026-05-09 06:43:47  0.00B 设置默认要执行的命令
CMD ["python3"]
                        
# 2026-05-09 06:43:47  36.00B 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	for src in idle3 pip3 pydoc3 python3 python3-config; do 		dst="$(echo "$src" | tr -d 3)"; 		[ -s "/usr/local/bin/$src" ]; 		[ ! -e "/usr/local/bin/$dst" ]; 		ln -svT "$src" "/usr/local/bin/$dst"; 	done # buildkit
                        
# 2026-05-09 06:43:47  68.48MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 		wget -O python.tar.xz "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz"; 	echo "$PYTHON_SHA256 *python.tar.xz" | sha256sum -c -; 	wget -O python.tar.xz.asc "https://www.python.org/ftp/python/${PYTHON_VERSION%%[a-z]*}/Python-$PYTHON_VERSION.tar.xz.asc"; 	GNUPGHOME="$(mktemp -d)"; export GNUPGHOME; 	gpg --batch --keyserver hkps://keys.openpgp.org --recv-keys "$GPG_KEY"; 	gpg --batch --verify python.tar.xz.asc python.tar.xz; 	gpgconf --kill all; 	rm -rf "$GNUPGHOME" python.tar.xz.asc; 	mkdir -p /usr/src/python; 	tar --extract --directory /usr/src/python --strip-components=1 --file python.tar.xz; 	rm python.tar.xz; 		cd /usr/src/python; 	gnuArch="$(dpkg-architecture --query DEB_BUILD_GNU_TYPE)"; 	./configure 		--build="$gnuArch" 		--enable-loadable-sqlite-extensions 		--enable-optimizations 		--enable-option-checking=fatal 		--enable-shared 		$(test "${gnuArch%%-*}" != 'riscv64' && echo '--with-lto') 		--with-ensurepip 	; 	nproc="$(nproc)"; 	EXTRA_CFLAGS="$(dpkg-buildflags --get CFLAGS)"; 	LDFLAGS="$(dpkg-buildflags --get LDFLAGS)"; 	arch="$(dpkg --print-architecture)"; arch="${arch##*-}"; 	case "$arch" in 		amd64|arm64) 			EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer"; 			;; 		i386) 			;; 		*) 			EXTRA_CFLAGS="${EXTRA_CFLAGS:-} -fno-omit-frame-pointer"; 			;; 	esac; 	make -j "$nproc" 		"EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" 		"LDFLAGS=${LDFLAGS:-}" 	; 	rm python; 	make -j "$nproc" 		"EXTRA_CFLAGS=${EXTRA_CFLAGS:-}" 		"LDFLAGS=${LDFLAGS:-} -Wl,-rpath='\$\$ORIGIN/../lib'" 		python 	; 	make install; 		bin="$(readlink -ve /usr/local/bin/python3)"; 	dir="$(dirname "$bin")"; 	mkdir -p "/usr/share/gdb/auto-load/$dir"; 	cp -vL Tools/gdb/libpython.py "/usr/share/gdb/auto-load/$bin-gdb.py"; 		cd /; 	rm -rf /usr/src/python; 		find /usr/local -depth 		\( 			\( -type d -a \( -name test -o -name tests -o -name idle_test \) \) 			-o \( -type f -a \( -name '*.pyc' -o -name '*.pyo' -o -name 'libpython*.a' \) \) 		\) -exec rm -rf '{}' + 	; 		ldconfig; 		export PYTHONDONTWRITEBYTECODE=1; 	python3 --version; 	pip3 --version # buildkit
                        
# 2026-05-09 06:35:01  0.00B 设置环境变量 PYTHON_SHA256
ENV PYTHON_SHA256=c08bc65a81971c1dd5783182826503369466c7e67374d1646519adf05207b684
                        
# 2026-05-09 06:35:01  0.00B 设置环境变量 PYTHON_VERSION
ENV PYTHON_VERSION=3.12.13
                        
# 2026-05-09 06:35:01  0.00B 设置环境变量 GPG_KEY
ENV GPG_KEY=7169605F62C751356D054A26A821E680E5FA6305
                        
# 2026-05-09 06:35:01  17.84MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	apt-get update; 	apt-get install -y --no-install-recommends 		libbluetooth-dev 		tk-dev 		uuid-dev 	; 	apt-get dist-clean # buildkit
                        
# 2026-05-09 06:35:01  0.00B 设置环境变量 LANG
ENV LANG=C.UTF-8
                        
# 2026-05-09 06:35:01  0.00B 设置环境变量 PATH
ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
                        
# 2026-05-09 05:18:02  655.79MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -ex; 	apt-get update; 	apt-get install -y --no-install-recommends 		autoconf 		automake 		bzip2 		default-libmysqlclient-dev 		dpkg-dev 		file 		g++ 		gcc 		imagemagick 		libbz2-dev 		libc6-dev 		libcurl4-openssl-dev 		libdb-dev 		libevent-dev 		libffi-dev 		libgdbm-dev 		libglib2.0-dev 		libgmp-dev 		libjpeg-dev 		libkrb5-dev 		liblzma-dev 		libmagickcore-dev 		libmagickwand-dev 		libmaxminddb-dev 		libncurses5-dev 		libncursesw5-dev 		libpng-dev 		libpq-dev 		libreadline-dev 		libsqlite3-dev 		libssl-dev 		libtool 		libwebp-dev 		libxml2-dev 		libxslt-dev 		libyaml-dev 		make 		patch 		unzip 		xz-utils 		zlib1g-dev 	; 	apt-get dist-clean # buildkit
                        
# 2026-05-09 04:26:45  184.93MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	apt-get update; 	apt-get install -y --no-install-recommends 		git 		mercurial 		openssh-client 		subversion 				procps 	; 	apt-get dist-clean # buildkit
                        
# 2026-05-09 03:40:47  60.18MB 执行命令并创建新的镜像层
RUN /bin/sh -c set -eux; 	apt-get update; 	apt-get install -y --no-install-recommends 		ca-certificates 		curl 		gnupg 		netbase 		sq 		wget 	; 	apt-get dist-clean # buildkit
                        
# 2026-05-05 08:00:00  119.87MB 
# debian.sh --arch 'amd64' out/ 'trixie' '@1777939200'
                        
                    

镜像信息

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更多版本

ghcr.io/scverse/scvi-tools:py3.13-cu12-latest-dev

linux/amd64 ghcr.io8.18GB2026-05-22 00:32
21